Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 BRWD1P1-201ENST00000401091 371 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 AC010740.1-201ENST00000417035 684 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 AC108725.1-201ENST00000495472 409 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 TEX28P1-201ENST00000613479 1221 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 TEX28P2-201ENST00000617764 1221 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 AC087499.5-201ENST00000452760 1342 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 AC006538.1-201ENST00000567905 1585 ntBASIC16.84■□□□□ 0.29
PHOX2BQ99453 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PHOX2BQ99453 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHOX2BQ99453 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.29
PHOX2BQ99453 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PHOX2BQ99453 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHOX2BQ99453 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHOX2BQ99453 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.83■□□□□ 0.28
PHOX2BQ99453 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 ABALON-201ENST00000629058 1903 ntBASIC16.82■□□□□ 0.28
PHOX2BQ99453 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 AC012497.1-201ENST00000429392 575 ntBASIC16.82■□□□□ 0.28
PHOX2BQ99453 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 AP001002.2-201ENST00000625137 386 ntBASIC16.82■□□□□ 0.28
PHOX2BQ99453 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms