Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC17Q96LX7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 AL589702.1-201ENST00000641229 1509 ntBASIC19.3■□□□□ 0.68
CCDC17Q96LX7 AC005915.1-201ENST00000624912 2018 ntBASIC19.3■□□□□ 0.68
CCDC17Q96LX7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.3■□□□□ 0.68
CCDC17Q96LX7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 AL512638.1-201ENST00000457493 794 ntBASIC19.3■□□□□ 0.68
CCDC17Q96LX7 HLA-V-204ENST00000476601 1289 ntBASIC19.3■□□□□ 0.68
CCDC17Q96LX7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 AC027369.6-201ENST00000525520 931 ntBASIC19.3■□□□□ 0.68
CCDC17Q96LX7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 AC024267.1-201ENST00000582320 895 ntBASIC19.3■□□□□ 0.68
CCDC17Q96LX7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC17Q96LX7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 AL590560.3-201ENST00000623350 461 ntBASIC19.29■□□□□ 0.68
CCDC17Q96LX7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 RNF165-205ENST00000588679 2904 ntBASIC19.29■□□□□ 0.68
CCDC17Q96LX7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 LETM1P2-201ENST00000597330 2178 ntBASIC19.29■□□□□ 0.68
CCDC17Q96LX7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC17Q96LX7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 RN7SL828P-201ENST00000607615 303 ntBASIC19.28■□□□□ 0.68
CCDC17Q96LX7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 SPDYE12P-201ENST00000618416 771 ntBASIC19.28■□□□□ 0.68
CCDC17Q96LX7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms