Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAPGEF4Q8WZA2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 AL391256.1-201ENST00000443260 1855 ntBASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 SPDYE19P-201ENST00000338590 713 ntBASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 DGCR5-201ENST00000399539 862 ntBASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 ATP5G2P4-201ENST00000442175 420 ntBASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 SERBP1P3-201ENST00000459980 809 ntBASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 DOC2GP-202ENST00000514950 1163 ntBASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 MIR6752-201ENST00000618442 71 ntBASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
RAPGEF4Q8WZA2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RAPGEF4Q8WZA2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
RAPGEF4Q8WZA2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAPGEF4Q8WZA2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.64■■□□□ 1.06
RAPGEF4Q8WZA2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.64■■□□□ 1.06
RAPGEF4Q8WZA2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RAPGEF4Q8WZA2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 ARSEP1-201ENST00000420443 635 ntBASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 AC044860.1-202ENST00000559481 777 ntBASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 AC020765.3-201ENST00000613051 740 ntBASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 AL589702.1-201ENST00000641229 1509 ntBASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF4Q8WZA2 AL512652.2-201ENST00000625156 1716 ntBASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 AC093004.1-201ENST00000508850 424 ntBASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 AP002490.2-201ENST00000524791 560 ntBASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 AC004790.1-201ENST00000612686 536 ntBASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPGEF4Q8WZA2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms