Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 AC009407.1-201ENST00000568958 598 ntBASIC25.4■■□□□ 1.66
CCNB3Q8WWL7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCNB3Q8WWL7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCNB3Q8WWL7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CCNB3Q8WWL7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCNB3Q8WWL7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CCNB3Q8WWL7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 RPL37AP1-201ENST00000412502 279 ntBASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 AC098859.1-201ENST00000502915 1238 ntBASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 AL133215.2-201ENST00000609242 977 ntBASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC25.39■■□□□ 1.65
CCNB3Q8WWL7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 MTND6P24-201ENST00000440466 518 ntBASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 RN7SL828P-201ENST00000607615 303 ntBASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 AL031731.1-201ENST00000642131 2094 ntBASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 AC087499.5-201ENST00000452760 1342 ntBASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCNB3Q8WWL7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AC006538.1-201ENST00000567905 1585 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 COX5BP8-201ENST00000416911 349 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 RN7SL692P-201ENST00000464677 288 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 RNA5SP410-201ENST00000516285 106 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AL596325.1-201ENST00000563991 1082 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AC105021.1-202ENST00000570572 669 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AC004233.3-201ENST00000607794 1269 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AL358472.5-202ENST00000641448 1267 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 AC106886.4-201ENST00000623557 2502 ntBASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC25.37■■□□□ 1.65
CCNB3Q8WWL7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms