Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.02■□□□□ -0
FNDC9Q8TBE3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.02■□□□□ -0
FNDC9Q8TBE3 ACTG1P14-201ENST00000446382 1122 ntBASIC15.02■□□□□ -0
FNDC9Q8TBE3 DNAJB3-202ENST00000449667 1266 ntBASIC15.02■□□□□ -0
FNDC9Q8TBE3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
FNDC9Q8TBE3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.02■□□□□ -0
FNDC9Q8TBE3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.02■□□□□ -0
FNDC9Q8TBE3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.02■□□□□ -0
FNDC9Q8TBE3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.02■□□□□ -0
FNDC9Q8TBE3 AL596442.2-201ENST00000610240 980 ntBASIC15.02■□□□□ -0
FNDC9Q8TBE3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.02■□□□□ -0
FNDC9Q8TBE3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.02■□□□□ -0
FNDC9Q8TBE3 AP001350.2-201ENST00000625104 1094 ntBASIC15.02■□□□□ -0
FNDC9Q8TBE3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC9Q8TBE3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 AC002056.1-201ENST00000395613 760 ntBASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 AP006288.1-201ENST00000446065 395 ntBASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 AP001160.2-201ENST00000596071 487 ntBASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC9Q8TBE3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 MTRF1LP2-201ENST00000506027 1122 ntBASIC15□□□□□ -0.01
FNDC9Q8TBE3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15□□□□□ -0.01
FNDC9Q8TBE3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FNDC9Q8TBE3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms