Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNIH3Q8TBE1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 AC006277.1-201ENST00000624348 1610 ntBASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 Z83836.1-201ENST00000624605 1642 ntBASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 AL359075.1-203ENST00000462729 1002 ntBASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 AL138831.2-201ENST00000606564 490 ntBASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 AC112504.1-201ENST00000623415 1841 ntBASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 CDC14C-201ENST00000428251 1719 ntBASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 LINC02447-202ENST00000501888 2146 ntBASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNIH3Q8TBE1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 REXO1L8P-201ENST00000604378 1897 ntBASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 STARP1-201ENST00000397973 869 ntBASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 RNF126P1-202ENST00000569893 925 ntBASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 AC005336.2-201ENST00000593183 939 ntBASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 AL139011.1-202ENST00000642063 584 ntBASIC15.27■□□□□ 0.04
CNIH3Q8TBE1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CNIH3Q8TBE1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 LINC01568-207ENST00000641790 1380 ntBASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms