Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL3Q8N8U3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RTL3Q8N8U3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL3Q8N8U3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL3Q8N8U3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL3Q8N8U3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RTL3Q8N8U3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RTL3Q8N8U3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 HTR5BP-201ENST00000430851 1154 ntBASIC17.06■□□□□ 0.32
RTL3Q8N8U3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 AC020765.3-201ENST00000613051 740 ntBASIC17.06■□□□□ 0.32
RTL3Q8N8U3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 PCDHA14-201ENST00000506751 2298 ntBASIC17.06■□□□□ 0.32
RTL3Q8N8U3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RTL3Q8N8U3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 AC016027.1-202ENST00000607927 1699 ntBASIC17.05■□□□□ 0.32
RTL3Q8N8U3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 GPX1P2-201ENST00000429271 606 ntBASIC17.05■□□□□ 0.32
RTL3Q8N8U3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.05■□□□□ 0.32
RTL3Q8N8U3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTL3Q8N8U3 WASH6P-202ENST00000359512 1437 ntBASIC17.04■□□□□ 0.32
RTL3Q8N8U3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 AL355306.1-201ENST00000415580 579 ntBASIC17.04■□□□□ 0.32
RTL3Q8N8U3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 ACTG1P14-201ENST00000446382 1122 ntBASIC17.04■□□□□ 0.32
RTL3Q8N8U3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.04■□□□□ 0.32
RTL3Q8N8U3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms