Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
KRT78Q8N1N4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 AL139384.1-201ENST00000612143 3047 ntBASIC16.1■□□□□ 0.17
KRT78Q8N1N4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 AC026396.1-201ENST00000419388 421 ntBASIC16.1■□□□□ 0.17
KRT78Q8N1N4 AL590627.1-203ENST00000421194 1026 ntBASIC16.1■□□□□ 0.17
KRT78Q8N1N4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 HCG4B-203ENST00000450128 991 ntBASIC16.1■□□□□ 0.17
KRT78Q8N1N4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 AL645728.2-201ENST00000641974 660 ntBASIC16.1■□□□□ 0.17
KRT78Q8N1N4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 IL9RP2-201ENST00000423948 1312 ntBASIC16.1■□□□□ 0.17
KRT78Q8N1N4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 AC104109.2-201ENST00000602919 1418 ntBASIC16.1■□□□□ 0.17
KRT78Q8N1N4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT78Q8N1N4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 AC124067.4-201ENST00000519691 2379 ntBASIC16.09■□□□□ 0.17
KRT78Q8N1N4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 UBALD1-205ENST00000590891 2641 ntBASIC16.09■□□□□ 0.17
KRT78Q8N1N4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 RPL13AP23-201ENST00000480739 586 ntBASIC16.09■□□□□ 0.17
KRT78Q8N1N4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT78Q8N1N4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms