Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST3H2AQ7L7L0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 TOP3BP1-201ENST00000420768 1380 ntBASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 PTCHD3P3-201ENST00000403073 906 ntBASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 LAGE3P1-201ENST00000425356 484 ntBASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 KRT18P56-201ENST00000507275 550 ntBASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 AC073648.2-201ENST00000510116 352 ntBASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 HLA-A-202ENST00000376806 1854 ntBASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST3H2AQ7L7L0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 HLA-J-202ENST00000469281 1241 ntBASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 AF238378.1-201ENST00000526806 358 ntBASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 AC021087.4-201ENST00000563761 564 ntBASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 IFNL4P1-201ENST00000607083 540 ntBASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 PCDHA1-201ENST00000378133 2726 ntBASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms