Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST2H3AQ71DI3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 PRSS29P-201ENST00000440800 595 ntBASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 AC087641.1-201ENST00000557561 1021 ntBASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 AL049840.3-201ENST00000602669 611 ntBASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 AC004790.2-201ENST00000623588 572 ntBASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 GGT3P-204ENST00000453783 1664 ntBASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST2H3AQ71DI3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 PCDH8P1-201ENST00000428983 2773 ntBASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 ME2P1-201ENST00000426028 1970 ntBASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 MRPL3P1-201ENST00000400109 1033 ntBASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 FAM185BP-201ENST00000443595 716 ntBASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 AC010654.1-201ENST00000615722 808 ntBASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 AP001350.2-201ENST00000625104 1094 ntBASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 AL671710.1-201ENST00000610245 2349 ntBASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST2H3AQ71DI3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms