Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 RNA5SP419-201ENST00000515908 135 ntBASIC18.78■□□□□ 0.6
SHC4Q6S5L8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 AP002469.2-201ENST00000531724 424 ntBASIC18.78■□□□□ 0.6
SHC4Q6S5L8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 AC012569.1-201ENST00000591191 1524 ntBASIC18.78■□□□□ 0.6
SHC4Q6S5L8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHC4Q6S5L8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 POU5F1P6-201ENST00000466990 990 ntBASIC18.77■□□□□ 0.6
SHC4Q6S5L8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC4Q6S5L8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 RPS2P28-201ENST00000314255 741 ntBASIC18.76■□□□□ 0.59
SHC4Q6S5L8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 HMGA1P7-201ENST00000406908 502 ntBASIC18.76■□□□□ 0.59
SHC4Q6S5L8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHC4Q6S5L8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 MRPL3P1-201ENST00000400109 1033 ntBASIC18.75■□□□□ 0.59
SHC4Q6S5L8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 AL031284.1-201ENST00000419297 478 ntBASIC18.75■□□□□ 0.59
SHC4Q6S5L8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 MIR4515-201ENST00000584082 81 ntBASIC18.75■□□□□ 0.59
SHC4Q6S5L8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms