Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 PRYP6-201ENST00000514804 343 ntBASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 IGHV3-42-201ENST00000520410 361 ntBASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC62Q6P9F0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 KRT8P39-201ENST00000396270 1433 ntBASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 AC007967.4-201ENST00000614700 386 ntBASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC62Q6P9F0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 AC073439.1-201ENST00000624121 1774 ntBASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 AC004890.2-204ENST00000481968 304 ntBASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC62Q6P9F0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms