Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 AC020765.3-201ENST00000613051 740 ntBASIC17.28■□□□□ 0.36
TRNP1Q6NT89 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRNP1Q6NT89 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.27■□□□□ 0.36
TRNP1Q6NT89 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRNP1Q6NT89 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRNP1Q6NT89 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 DOC2GP-204ENST00000639052 2548 ntBASIC17.26■□□□□ 0.35
TRNP1Q6NT89 CYP2T1P-202ENST00000641596 2535 ntBASIC17.26■□□□□ 0.35
TRNP1Q6NT89 REXO1L8P-201ENST00000604378 1897 ntBASIC17.26■□□□□ 0.35
TRNP1Q6NT89 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 AC018695.7-201ENST00000624587 2492 ntBASIC17.26■□□□□ 0.35
TRNP1Q6NT89 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRNP1Q6NT89 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms