Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 AP002490.2-201ENST00000524791 560 ntBASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 MPDU1-223ENST00000582151 728 ntBASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 C20orf181-201ENST00000623918 480 ntBASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC39BQ5VTQ0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 MKNK2P1-201ENST00000437526 628 ntBASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 AC087641.1-201ENST00000557561 1021 ntBASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC39BQ5VTQ0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 RPSAP43-201ENST00000402237 625 ntBASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 MIR1233-2-201ENST00000408138 82 ntBASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 MIR1233-1-201ENST00000408722 82 ntBASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 AC010327.4-202ENST00000591484 748 ntBASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 AC131009.4-201ENST00000624048 1740 ntBASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC39BQ5VTQ0 AC092171.3-201ENST00000610122 2651 ntBASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC39BQ5VTQ0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms