Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AC023824.1-201ENST00000562945 2975 ntBASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AC243591.1-201ENST00000452967 1364 ntBASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AP005901.3-202ENST00000581653 237 ntBASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TERC-201ENST00000602385 541 ntBASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AL512652.2-201ENST00000625156 1716 ntBASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 AP005117.1-202ENST00000581724 1908 ntBASIC11.43□□□□□ -0.58
LINC00242Q5T6M2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 SNX33P1-201ENST00000592116 1762 ntBASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AC063952.2-201ENST00000498792 1227 ntBASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AC093827.2-201ENST00000512654 315 ntBASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AP000867.4-201ENST00000641616 219 ntBASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms