Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GTF2BQ00403 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.13■□□□□ 0.49
GTF2BQ00403 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GTF2BQ00403 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
GTF2BQ00403 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.12■□□□□ 0.49
GTF2BQ00403 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.12■□□□□ 0.49
GTF2BQ00403 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.12■□□□□ 0.49
GTF2BQ00403 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
GTF2BQ00403 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.12■□□□□ 0.49
GTF2BQ00403 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 AC211486.1-202ENST00000416371 468 ntBASIC18.12■□□□□ 0.49
GTF2BQ00403 AC093724.1-201ENST00000448659 1027 ntBASIC18.12■□□□□ 0.49
GTF2BQ00403 POU5F1P6-201ENST00000466990 990 ntBASIC18.12■□□□□ 0.49
GTF2BQ00403 AC211476.1-201ENST00000503899 468 ntBASIC18.12■□□□□ 0.49
GTF2BQ00403 AC079140.1-201ENST00000508039 487 ntBASIC18.12■□□□□ 0.49
GTF2BQ00403 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.12■□□□□ 0.49
GTF2BQ00403 AL138918.1-201ENST00000568306 659 ntBASIC18.12■□□□□ 0.49
GTF2BQ00403 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.12■□□□□ 0.49
GTF2BQ00403 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 AC073389.1-201ENST00000595595 795 ntBASIC18.12■□□□□ 0.49
GTF2BQ00403 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.12■□□□□ 0.49
GTF2BQ00403 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.12■□□□□ 0.49
GTF2BQ00403 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.12■□□□□ 0.49
GTF2BQ00403 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GTF2BQ00403 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.12■□□□□ 0.49
GTF2BQ00403 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GTF2BQ00403 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 AL118508.1-201ENST00000613502 2345 ntBASIC18.11■□□□□ 0.49
GTF2BQ00403 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GTF2BQ00403 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 AC099398.1-201ENST00000567919 2776 ntBASIC18.11■□□□□ 0.49
GTF2BQ00403 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 SPCS2P4-201ENST00000436160 681 ntBASIC18.11■□□□□ 0.49
GTF2BQ00403 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.11■□□□□ 0.49
GTF2BQ00403 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.11■□□□□ 0.49
GTF2BQ00403 AC008267.7-201ENST00000624570 1194 ntBASIC18.11■□□□□ 0.49
GTF2BQ00403 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 AL513210.1-201ENST00000629608 234 ntBASIC18.11■□□□□ 0.49
GTF2BQ00403 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
GTF2BQ00403 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
GTF2BQ00403 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GTF2BQ00403 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GTF2BQ00403 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GTF2BQ00403 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GTF2BQ00403 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GTF2BQ00403 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.1■□□□□ 0.49
GTF2BQ00403 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GTF2BQ00403 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GTF2BQ00403 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GTF2BQ00403 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GTF2BQ00403 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.1■□□□□ 0.49
GTF2BQ00403 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GTF2BQ00403 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.1■□□□□ 0.49
GTF2BQ00403 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.1■□□□□ 0.49
GTF2BQ00403 AP006288.1-201ENST00000446065 395 ntBASIC18.1■□□□□ 0.49
GTF2BQ00403 TIMM8BP1-201ENST00000452384 211 ntBASIC18.1■□□□□ 0.49
GTF2BQ00403 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.1■□□□□ 0.49
GTF2BQ00403 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.1■□□□□ 0.49
GTF2BQ00403 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.1■□□□□ 0.49
GTF2BQ00403 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
GTF2BQ00403 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.1■□□□□ 0.49
GTF2BQ00403 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.1■□□□□ 0.49
GTF2BQ00403 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.1■□□□□ 0.49
GTF2BQ00403 AC022145.2-201ENST00000598203 171 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms