Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 MIR3909-201ENST00000579518 119 ntBASIC14.57□□□□□ -0.08
HIST1H3AP68431 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 AL645728.2-201ENST00000641974 660 ntBASIC14.57□□□□□ -0.08
HIST1H3AP68431 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H3AP68431 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H3AP68431 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 AL391005.1-201ENST00000623953 2435 ntBASIC14.56□□□□□ -0.08
HIST1H3AP68431 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 LINC01144-201ENST00000626198 1710 ntBASIC14.56□□□□□ -0.08
HIST1H3AP68431 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 CRYGEP-201ENST00000412192 528 ntBASIC14.56□□□□□ -0.08
HIST1H3AP68431 RHOQP3-201ENST00000437982 621 ntBASIC14.56□□□□□ -0.08
HIST1H3AP68431 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 AC079776.4-201ENST00000511039 504 ntBASIC14.56□□□□□ -0.08
HIST1H3AP68431 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 AC145285.3-201ENST00000564603 959 ntBASIC14.56□□□□□ -0.08
HIST1H3AP68431 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 AC020765.3-201ENST00000613051 740 ntBASIC14.56□□□□□ -0.08
HIST1H3AP68431 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
HIST1H3AP68431 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H3AP68431 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 RNU1-129P-201ENST00000384064 167 ntBASIC14.55□□□□□ -0.08
HIST1H3AP68431 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 AL031432.2-201ENST00000566714 459 ntBASIC14.55□□□□□ -0.08
HIST1H3AP68431 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 AL928711.1-201ENST00000570165 459 ntBASIC14.55□□□□□ -0.08
HIST1H3AP68431 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 U1.21-201ENST00000580816 167 ntBASIC14.55□□□□□ -0.08
HIST1H3AP68431 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 Z83851.2-201ENST00000609564 659 ntBASIC14.55□□□□□ -0.08
HIST1H3AP68431 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms