Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TPM4P67936 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM4P67936 AC006277.1-201ENST00000624348 1610 ntBASIC18.75■□□□□ 0.59
TPM4P67936 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM4P67936 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM4P67936 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM4P67936 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 AP002414.1-201ENST00000391405 1147 ntBASIC18.75■□□□□ 0.59
TPM4P67936 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TPM4P67936 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM4P67936 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM4P67936 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.75■□□□□ 0.59
TPM4P67936 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.75■□□□□ 0.59
TPM4P67936 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TPM4P67936 AL596087.1-201ENST00000400979 1969 ntBASIC18.75■□□□□ 0.59
TPM4P67936 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
TPM4P67936 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TPM4P67936 AC024909.3-201ENST00000611513 2257 ntBASIC18.75■□□□□ 0.59
TPM4P67936 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TPM4P67936 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM4P67936 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TPM4P67936 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM4P67936 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TPM4P67936 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM4P67936 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TPM4P67936 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM4P67936 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TPM4P67936 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM4P67936 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TPM4P67936 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM4P67936 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.74■□□□□ 0.59
TPM4P67936 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
TPM4P67936 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.74■□□□□ 0.59
TPM4P67936 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM4P67936 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM4P67936 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM4P67936 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TPM4P67936 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM4P67936 AC097637.2-201ENST00000624096 1997 ntBASIC18.73■□□□□ 0.59
TPM4P67936 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM4P67936 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.73■□□□□ 0.59
TPM4P67936 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM4P67936 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 TP73-AS1-210ENST00000637775 1455 ntBASIC18.73■□□□□ 0.59
TPM4P67936 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM4P67936 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM4P67936 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.73■□□□□ 0.59
TPM4P67936 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 KRT18P57-201ENST00000443599 1254 ntBASIC18.73■□□□□ 0.59
TPM4P67936 LINC01238-205ENST00000567549 1107 ntBASIC18.73■□□□□ 0.59
TPM4P67936 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.73■□□□□ 0.59
TPM4P67936 AC006011.2-201ENST00000621313 1158 ntBASIC18.73■□□□□ 0.59
TPM4P67936 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM4P67936 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM4P67936 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms