Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP46P62068 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USP46P62068 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
USP46P62068 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
USP46P62068 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
USP46P62068 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.52■□□□□ 0.4
USP46P62068 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.52■□□□□ 0.4
USP46P62068 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 AC068418.2-201ENST00000577309 3703 ntBASIC17.52■□□□□ 0.4
USP46P62068 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
USP46P62068 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.52■□□□□ 0.4
USP46P62068 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
USP46P62068 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.52■□□□□ 0.4
USP46P62068 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
USP46P62068 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.52■□□□□ 0.4
USP46P62068 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.52■□□□□ 0.4
USP46P62068 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.52■□□□□ 0.4
USP46P62068 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.52■□□□□ 0.4
USP46P62068 AC009093.7-201ENST00000623853 1223 ntBASIC17.52■□□□□ 0.4
USP46P62068 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP46P62068 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.52■□□□□ 0.39
USP46P62068 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP46P62068 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP46P62068 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
USP46P62068 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP46P62068 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP46P62068 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
USP46P62068 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
USP46P62068 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
USP46P62068 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP46P62068 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP46P62068 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.51■□□□□ 0.39
USP46P62068 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.51■□□□□ 0.39
USP46P62068 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.51■□□□□ 0.39
USP46P62068 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
USP46P62068 AC106028.4-201ENST00000614509 607 ntBASIC17.51■□□□□ 0.39
USP46P62068 LINC00628-201ENST00000628516 1289 ntBASIC17.51■□□□□ 0.39
USP46P62068 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.51■□□□□ 0.39
USP46P62068 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP46P62068 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.5■□□□□ 0.39
USP46P62068 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
USP46P62068 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
USP46P62068 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
USP46P62068 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.5■□□□□ 0.39
USP46P62068 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP46P62068 AL645939.2-201ENST00000427340 991 ntBASIC17.5■□□□□ 0.39
USP46P62068 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.5■□□□□ 0.39
USP46P62068 HMGN1P19-201ENST00000436976 333 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms