Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TNNI2P48788 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 AC009477.1-201ENST00000452936 217 ntBASIC19.7■□□□□ 0.74
TNNI2P48788 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.7■□□□□ 0.74
TNNI2P48788 AC098859.1-201ENST00000502915 1238 ntBASIC19.7■□□□□ 0.74
TNNI2P48788 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.7■□□□□ 0.74
TNNI2P48788 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.7■□□□□ 0.74
TNNI2P48788 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.7■□□□□ 0.74
TNNI2P48788 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.7■□□□□ 0.74
TNNI2P48788 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.7■□□□□ 0.74
TNNI2P48788 TEX28P1-201ENST00000613479 1221 ntBASIC19.7■□□□□ 0.74
TNNI2P48788 TEX28P2-201ENST00000617764 1221 ntBASIC19.7■□□□□ 0.74
TNNI2P48788 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TNNI2P48788 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNNI2P48788 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.7■□□□□ 0.74
TNNI2P48788 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNNI2P48788 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.7■□□□□ 0.74
TNNI2P48788 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNNI2P48788 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNNI2P48788 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.69■□□□□ 0.74
TNNI2P48788 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TNNI2P48788 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
TNNI2P48788 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.69■□□□□ 0.74
TNNI2P48788 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.69■□□□□ 0.74
TNNI2P48788 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.69■□□□□ 0.74
TNNI2P48788 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.69■□□□□ 0.74
TNNI2P48788 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.69■□□□□ 0.74
TNNI2P48788 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.69■□□□□ 0.74
TNNI2P48788 RN7SL828P-201ENST00000607615 303 ntBASIC19.69■□□□□ 0.74
TNNI2P48788 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.69■□□□□ 0.74
TNNI2P48788 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
TNNI2P48788 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNNI2P48788 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.68■□□□□ 0.74
TNNI2P48788 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.68■□□□□ 0.74
TNNI2P48788 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.68■□□□□ 0.74
TNNI2P48788 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.68■□□□□ 0.74
TNNI2P48788 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.68■□□□□ 0.74
TNNI2P48788 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNNI2P48788 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TNNI2P48788 COX5BP8-201ENST00000416911 349 ntBASIC19.68■□□□□ 0.74
TNNI2P48788 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.68■□□□□ 0.74
TNNI2P48788 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.68■□□□□ 0.74
TNNI2P48788 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.68■□□□□ 0.74
TNNI2P48788 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.68■□□□□ 0.74
TNNI2P48788 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.68■□□□□ 0.74
TNNI2P48788 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TNNI2P48788 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TNNI2P48788 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.68■□□□□ 0.74
TNNI2P48788 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
TNNI2P48788 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.68■□□□□ 0.74
TNNI2P48788 LINC02012-201ENST00000608206 1725 ntBASIC19.68■□□□□ 0.74
TNNI2P48788 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNNI2P48788 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNNI2P48788 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNNI2P48788 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms