Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.56■□□□□ 0.72
NEDD4P46934 DNAJB3-202ENST00000449667 1266 ntBASIC19.56■□□□□ 0.72
NEDD4P46934 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
NEDD4P46934 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.56■□□□□ 0.72
NEDD4P46934 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.56■□□□□ 0.72
NEDD4P46934 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.56■□□□□ 0.72
NEDD4P46934 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 AL138918.1-201ENST00000568306 659 ntBASIC19.56■□□□□ 0.72
NEDD4P46934 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.56■□□□□ 0.72
NEDD4P46934 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.56■□□□□ 0.72
NEDD4P46934 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.56■□□□□ 0.72
NEDD4P46934 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NEDD4P46934 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEDD4P46934 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
NEDD4P46934 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
NEDD4P46934 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.55■□□□□ 0.72
NEDD4P46934 AC004461.1-201ENST00000412461 403 ntBASIC19.55■□□□□ 0.72
NEDD4P46934 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.55■□□□□ 0.72
NEDD4P46934 SPCS2P4-201ENST00000436160 681 ntBASIC19.55■□□□□ 0.72
NEDD4P46934 SPDYE11-202ENST00000450699 704 ntBASIC19.55■□□□□ 0.72
NEDD4P46934 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NEDD4P46934 RN7SL589P-201ENST00000481268 310 ntBASIC19.55■□□□□ 0.72
NEDD4P46934 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.55■□□□□ 0.72
NEDD4P46934 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NEDD4P46934 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.55■□□□□ 0.72
NEDD4P46934 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.55■□□□□ 0.72
NEDD4P46934 SPDYE9P-201ENST00000570642 692 ntBASIC19.55■□□□□ 0.72
NEDD4P46934 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.55■□□□□ 0.72
NEDD4P46934 SPDYE10P-202ENST00000612005 668 ntBASIC19.55■□□□□ 0.72
NEDD4P46934 SPDYE8P-202ENST00000612377 668 ntBASIC19.55■□□□□ 0.72
NEDD4P46934 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NEDD4P46934 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.55■□□□□ 0.72
NEDD4P46934 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 PCGF3-213ENST00000620529 1899 ntBASIC19.55■□□□□ 0.72
NEDD4P46934 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.55■□□□□ 0.72
NEDD4P46934 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEDD4P46934 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NEDD4P46934 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.54■□□□□ 0.72
NEDD4P46934 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 RPS8P6-201ENST00000426177 609 ntBASIC19.54■□□□□ 0.72
NEDD4P46934 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
NEDD4P46934 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.54■□□□□ 0.72
NEDD4P46934 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
NEDD4P46934 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.54■□□□□ 0.72
NEDD4P46934 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.54■□□□□ 0.72
NEDD4P46934 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
NEDD4P46934 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEDD4P46934 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEDD4P46934 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEDD4P46934 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NEDD4P46934 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEDD4P46934 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEDD4P46934 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.53■□□□□ 0.72
NEDD4P46934 KRT18P34-201ENST00000488218 1270 ntBASIC19.53■□□□□ 0.72
NEDD4P46934 AC069335.1-201ENST00000489972 472 ntBASIC19.53■□□□□ 0.72
NEDD4P46934 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.53■□□□□ 0.72
NEDD4P46934 AC093520.2-201ENST00000561830 333 ntBASIC19.53■□□□□ 0.72
NEDD4P46934 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.53■□□□□ 0.72
NEDD4P46934 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.53■□□□□ 0.72
NEDD4P46934 AC027612.4-201ENST00000605371 583 ntBASIC19.53■□□□□ 0.72
NEDD4P46934 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.53■□□□□ 0.72
NEDD4P46934 AL596442.2-201ENST00000610240 980 ntBASIC19.53■□□□□ 0.72
NEDD4P46934 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NEDD4P46934 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms