Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.38■□□□□ 0.37
MTHFRP42898 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.38■□□□□ 0.37
MTHFRP42898 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.38■□□□□ 0.37
MTHFRP42898 PRYP6-201ENST00000514804 343 ntBASIC17.38■□□□□ 0.37
MTHFRP42898 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.38■□□□□ 0.37
MTHFRP42898 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.38■□□□□ 0.37
MTHFRP42898 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.38■□□□□ 0.37
MTHFRP42898 AL589739.1-201ENST00000607720 493 ntBASIC17.38■□□□□ 0.37
MTHFRP42898 AC008738.7-201ENST00000609744 511 ntBASIC17.38■□□□□ 0.37
MTHFRP42898 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
MTHFRP42898 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
MTHFRP42898 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
MTHFRP42898 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
MTHFRP42898 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.37■□□□□ 0.37
MTHFRP42898 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MTHFRP42898 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.37■□□□□ 0.37
MTHFRP42898 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 LINC00895-201ENST00000629028 1637 ntBASIC17.37■□□□□ 0.37
MTHFRP42898 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MTHFRP42898 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
MTHFRP42898 MTND6P24-201ENST00000440466 518 ntBASIC17.37■□□□□ 0.37
MTHFRP42898 API5-211ENST00000534695 560 ntTSL 5 BASIC17.37■□□□□ 0.37
MTHFRP42898 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.37■□□□□ 0.37
MTHFRP42898 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.37■□□□□ 0.37
MTHFRP42898 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.37■□□□□ 0.37
MTHFRP42898 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.37■□□□□ 0.37
MTHFRP42898 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.37■□□□□ 0.37
MTHFRP42898 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MTHFRP42898 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
MTHFRP42898 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MTHFRP42898 AC009053.2-201ENST00000563701 2365 ntBASIC17.37■□□□□ 0.37
MTHFRP42898 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MTHFRP42898 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MTHFRP42898 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.36■□□□□ 0.37
MTHFRP42898 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.36■□□□□ 0.37
MTHFRP42898 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.36■□□□□ 0.37
MTHFRP42898 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.36■□□□□ 0.37
MTHFRP42898 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 GIMAP3P-201ENST00000495150 836 ntBASIC17.36■□□□□ 0.37
MTHFRP42898 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.36■□□□□ 0.37
MTHFRP42898 AL844908.2-201ENST00000609461 460 ntBASIC17.36■□□□□ 0.37
MTHFRP42898 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.36■□□□□ 0.37
MTHFRP42898 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.36■□□□□ 0.37
MTHFRP42898 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.36■□□□□ 0.37
MTHFRP42898 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.36■□□□□ 0.37
MTHFRP42898 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.36■□□□□ 0.37
MTHFRP42898 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 KRT8P49-201ENST00000604166 1432 ntBASIC17.36■□□□□ 0.37
MTHFRP42898 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MTHFRP42898 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MTHFRP42898 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms