Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LAMA1P25391 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LAMA1P25391 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.08■□□□□ 0.16
LAMA1P25391 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.08■□□□□ 0.16
LAMA1P25391 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LAMA1P25391 AL589702.1-201ENST00000641229 1509 ntBASIC16.07■□□□□ 0.16
LAMA1P25391 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.07■□□□□ 0.16
LAMA1P25391 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LAMA1P25391 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.07■□□□□ 0.16
LAMA1P25391 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 HAUS4P1-201ENST00000406739 1145 ntBASIC16.07■□□□□ 0.16
LAMA1P25391 TUBB1P2-201ENST00000422712 1306 ntBASIC16.07■□□□□ 0.16
LAMA1P25391 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.07■□□□□ 0.16
LAMA1P25391 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.07■□□□□ 0.16
LAMA1P25391 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LAMA1P25391 TUBB1P1-201ENST00000503144 1300 ntBASIC16.07■□□□□ 0.16
LAMA1P25391 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.07■□□□□ 0.16
LAMA1P25391 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.07■□□□□ 0.16
LAMA1P25391 AC007431.3-201ENST00000623221 587 ntBASIC16.07■□□□□ 0.16
LAMA1P25391 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 AC020907.1-201ENST00000616460 1350 ntBASIC16.07■□□□□ 0.16
LAMA1P25391 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.07■□□□□ 0.16
LAMA1P25391 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 AC008764.6-201ENST00000595909 2069 ntBASIC16.07■□□□□ 0.16
LAMA1P25391 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LAMA1P25391 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.07■□□□□ 0.16
LAMA1P25391 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 KRT18P34-201ENST00000488218 1270 ntBASIC16.06■□□□□ 0.16
LAMA1P25391 AP005482.1-201ENST00000563722 1273 ntBASIC16.06■□□□□ 0.16
LAMA1P25391 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 AC015936.2-201ENST00000593177 259 ntBASIC16.06■□□□□ 0.16
LAMA1P25391 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LAMA1P25391 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.06■□□□□ 0.16
LAMA1P25391 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LAMA1P25391 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.06■□□□□ 0.16
LAMA1P25391 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.06■□□□□ 0.16
LAMA1P25391 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
LAMA1P25391 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LAMA1P25391 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.06■□□□□ 0.16
LAMA1P25391 RNA5SP423-201ENST00000517127 109 ntBASIC16.06■□□□□ 0.16
LAMA1P25391 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.06■□□□□ 0.16
LAMA1P25391 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.06■□□□□ 0.16
LAMA1P25391 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.06■□□□□ 0.16
LAMA1P25391 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LAMA1P25391 TMEM261P1-201ENST00000604899 340 ntBASIC16.06■□□□□ 0.16
LAMA1P25391 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.06■□□□□ 0.16
LAMA1P25391 MIR6869-201ENST00000619434 62 ntBASIC16.06■□□□□ 0.16
LAMA1P25391 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LAMA1P25391 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.06■□□□□ 0.16
LAMA1P25391 AL603756.1-201ENST00000606511 2163 ntBASIC16.06■□□□□ 0.16
LAMA1P25391 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LAMA1P25391 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LAMA1P25391 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.05■□□□□ 0.16
LAMA1P25391 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.05■□□□□ 0.16
LAMA1P25391 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LAMA1P25391 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 SNX33P1-201ENST00000592116 1762 ntBASIC16.05■□□□□ 0.16
LAMA1P25391 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.05■□□□□ 0.16
LAMA1P25391 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.05■□□□□ 0.16
LAMA1P25391 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.05■□□□□ 0.16
LAMA1P25391 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.05■□□□□ 0.16
LAMA1P25391 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.05■□□□□ 0.16
LAMA1P25391 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LAMA1P25391 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LAMA1P25391 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.05■□□□□ 0.16
LAMA1P25391 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LAMA1P25391 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.05■□□□□ 0.16
LAMA1P25391 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.05■□□□□ 0.16
LAMA1P25391 AC114501.2-201ENST00000439631 535 ntBASIC16.05■□□□□ 0.16
LAMA1P25391 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms