Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC004461.1-201ENST00000412461 403 ntBASIC19.56■□□□□ 0.72
TOP1P11387 TFAMP1-201ENST00000412727 736 ntBASIC19.56■□□□□ 0.72
TOP1P11387 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.56■□□□□ 0.72
TOP1P11387 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP1P11387 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP1P11387 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.56■□□□□ 0.72
TOP1P11387 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.56■□□□□ 0.72
TOP1P11387 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP1P11387 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP1P11387 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TOP1P11387 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.56■□□□□ 0.72
TOP1P11387 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP1P11387 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TOP1P11387 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.55■□□□□ 0.72
TOP1P11387 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP1P11387 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TOP1P11387 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.55■□□□□ 0.72
TOP1P11387 TIMM8BP1-201ENST00000452384 211 ntBASIC19.55■□□□□ 0.72
TOP1P11387 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP1P11387 KRT8P48-201ENST00000515599 1220 ntBASIC19.55■□□□□ 0.72
TOP1P11387 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP1P11387 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.55■□□□□ 0.72
TOP1P11387 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TOP1P11387 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TOP1P11387 AC021097.1-201ENST00000607902 574 ntBASIC19.55■□□□□ 0.72
TOP1P11387 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.55■□□□□ 0.72
TOP1P11387 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.55■□□□□ 0.72
TOP1P11387 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TOP1P11387 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.55■□□□□ 0.72
TOP1P11387 AC106886.4-201ENST00000623557 2502 ntBASIC19.55■□□□□ 0.72
TOP1P11387 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.55■□□□□ 0.72
TOP1P11387 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TOP1P11387 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TOP1P11387 SNX33P1-201ENST00000592116 1762 ntBASIC19.55■□□□□ 0.72
TOP1P11387 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 AL391256.1-201ENST00000443260 1855 ntBASIC19.54■□□□□ 0.72
TOP1P11387 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TOP1P11387 AL645728.1-201ENST00000366221 2101 ntBASIC19.54■□□□□ 0.72
TOP1P11387 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP1P11387 WASH6P-202ENST00000359512 1437 ntBASIC19.54■□□□□ 0.72
TOP1P11387 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
TOP1P11387 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 SPDYE11-202ENST00000450699 704 ntBASIC19.54■□□□□ 0.72
TOP1P11387 RN7SL589P-201ENST00000481268 310 ntBASIC19.54■□□□□ 0.72
TOP1P11387 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.54■□□□□ 0.72
TOP1P11387 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 AL135744.1-201ENST00000565098 629 ntBASIC19.54■□□□□ 0.72
TOP1P11387 SPDYE9P-201ENST00000570642 692 ntBASIC19.54■□□□□ 0.72
TOP1P11387 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TOP1P11387 AC004835.2-201ENST00000603762 682 ntBASIC19.54■□□□□ 0.72
TOP1P11387 SPDYE10P-202ENST00000612005 668 ntBASIC19.54■□□□□ 0.72
TOP1P11387 SPDYE8P-202ENST00000612377 668 ntBASIC19.54■□□□□ 0.72
TOP1P11387 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP1P11387 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP1P11387 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TOP1P11387 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP1P11387 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP1P11387 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.54■□□□□ 0.72
TOP1P11387 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TOP1P11387 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TOP1P11387 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms