Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNB1P11230 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNB1P11230 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.83■□□□□ 0.29
CHRNB1P11230 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CHRNB1P11230 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.83■□□□□ 0.29
CHRNB1P11230 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CHRNB1P11230 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHRNB1P11230 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNB1P11230 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNB1P11230 AC098614.1-201ENST00000368528 745 ntBASIC16.83■□□□□ 0.28
CHRNB1P11230 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNB1P11230 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNB1P11230 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.83■□□□□ 0.28
CHRNB1P11230 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNB1P11230 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNB1P11230 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHRNB1P11230 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNB1P11230 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNB1P11230 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CHRNB1P11230 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNB1P11230 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 AC140912.1-201ENST00000577171 1054 ntBASIC16.83■□□□□ 0.28
CHRNB1P11230 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNB1P11230 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.83■□□□□ 0.28
CHRNB1P11230 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.83■□□□□ 0.28
CHRNB1P11230 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.83■□□□□ 0.28
CHRNB1P11230 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNB1P11230 SPTSSB-204ENST00000617024 1292 ntBASIC16.83■□□□□ 0.28
CHRNB1P11230 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.83■□□□□ 0.28
CHRNB1P11230 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNB1P11230 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNB1P11230 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB1P11230 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CHRNB1P11230 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNB1P11230 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNB1P11230 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNB1P11230 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNB1P11230 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB1P11230 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB1P11230 GPR53P-205ENST00000457298 1084 ntBASIC16.82■□□□□ 0.28
CHRNB1P11230 IGHV3-71-201ENST00000523324 359 ntBASIC16.82■□□□□ 0.28
CHRNB1P11230 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB1P11230 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB1P11230 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.82■□□□□ 0.28
CHRNB1P11230 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB1P11230 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB1P11230 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNB1P11230 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNB1P11230 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNB1P11230 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNB1P11230 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB1P11230 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB1P11230 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB1P11230 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CHRNB1P11230 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB1P11230 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CHRNB1P11230 BANF1P1-201ENST00000553684 263 ntBASIC16.81■□□□□ 0.28
CHRNB1P11230 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms