Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR6069-201ENST00000620069 79 ntBASIC19.19■□□□□ 0.66
COL2A1P02458 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL2A1P02458 AP001094.4-201ENST00000579008 2176 ntBASIC19.19■□□□□ 0.66
COL2A1P02458 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL2A1P02458 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.19■□□□□ 0.66
COL2A1P02458 AC007541.1-201ENST00000570282 1469 ntBASIC19.19■□□□□ 0.66
COL2A1P02458 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL2A1P02458 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.19■□□□□ 0.66
COL2A1P02458 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL2A1P02458 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL2A1P02458 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL2A1P02458 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL2A1P02458 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL2A1P02458 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL2A1P02458 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.18■□□□□ 0.66
COL2A1P02458 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.18■□□□□ 0.66
COL2A1P02458 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.18■□□□□ 0.66
COL2A1P02458 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.18■□□□□ 0.66
COL2A1P02458 HIST3H2BA-201ENST00000436555 524 ntBASIC19.18■□□□□ 0.66
COL2A1P02458 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.18■□□□□ 0.66
COL2A1P02458 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.18■□□□□ 0.66
COL2A1P02458 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.18■□□□□ 0.66
COL2A1P02458 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.18■□□□□ 0.66
COL2A1P02458 AC025048.3-201ENST00000590609 569 ntBASIC19.18■□□□□ 0.66
COL2A1P02458 AC005702.4-201ENST00000618393 416 ntBASIC19.18■□□□□ 0.66
COL2A1P02458 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.18■□□□□ 0.66
COL2A1P02458 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.18■□□□□ 0.66
COL2A1P02458 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.18■□□□□ 0.66
COL2A1P02458 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.18■□□□□ 0.66
COL2A1P02458 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.18■□□□□ 0.66
COL2A1P02458 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.18■□□□□ 0.66
COL2A1P02458 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
COL2A1P02458 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.18■□□□□ 0.66
COL2A1P02458 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL2A1P02458 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.17■□□□□ 0.66
COL2A1P02458 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.17■□□□□ 0.66
COL2A1P02458 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
COL2A1P02458 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
COL2A1P02458 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
COL2A1P02458 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.17■□□□□ 0.66
COL2A1P02458 POU5F1P6-201ENST00000466990 990 ntBASIC19.17■□□□□ 0.66
COL2A1P02458 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL2A1P02458 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.17■□□□□ 0.66
COL2A1P02458 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.17■□□□□ 0.66
COL2A1P02458 AC074044.1-201ENST00000609673 707 ntBASIC19.17■□□□□ 0.66
COL2A1P02458 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COL2A1P02458 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COL2A1P02458 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.17■□□□□ 0.66
COL2A1P02458 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.17■□□□□ 0.66
COL2A1P02458 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.17■□□□□ 0.66
COL2A1P02458 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL2A1P02458 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL2A1P02458 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL2A1P02458 SPDYE19P-201ENST00000338590 713 ntBASIC19.16■□□□□ 0.66
COL2A1P02458 AC098614.1-201ENST00000368528 745 ntBASIC19.16■□□□□ 0.66
COL2A1P02458 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 AC087499.6-201ENST00000411576 835 ntBASIC19.16■□□□□ 0.66
COL2A1P02458 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.16■□□□□ 0.66
COL2A1P02458 GNAQP1-201ENST00000444815 1067 ntBASIC19.16■□□□□ 0.66
COL2A1P02458 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.16■□□□□ 0.66
COL2A1P02458 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.16■□□□□ 0.66
COL2A1P02458 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
COL2A1P02458 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.16■□□□□ 0.66
COL2A1P02458 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 MIR6752-201ENST00000618442 71 ntBASIC19.16■□□□□ 0.66
COL2A1P02458 AC004461.2-201ENST00000629517 803 ntBASIC19.16■□□□□ 0.66
COL2A1P02458 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.16■□□□□ 0.66
COL2A1P02458 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL2A1P02458 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL2A1P02458 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL2A1P02458 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms