Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.31■□□□□ 0.52
CD4P01730 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.31■□□□□ 0.52
CD4P01730 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.31■□□□□ 0.52
CD4P01730 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.31■□□□□ 0.52
CD4P01730 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CD4P01730 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CD4P01730 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.31■□□□□ 0.52
CD4P01730 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.31■□□□□ 0.52
CD4P01730 GIMAP3P-201ENST00000495150 836 ntBASIC18.31■□□□□ 0.52
CD4P01730 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 AC010336.2-201ENST00000564226 506 ntBASIC18.31■□□□□ 0.52
CD4P01730 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.31■□□□□ 0.52
CD4P01730 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.31■□□□□ 0.52
CD4P01730 AL133215.2-201ENST00000609242 977 ntBASIC18.31■□□□□ 0.52
CD4P01730 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 SPTSSB-204ENST00000617024 1292 ntBASIC18.31■□□□□ 0.52
CD4P01730 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CD4P01730 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD4P01730 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CD4P01730 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CD4P01730 PP12613-201ENST00000424958 2230 ntBASIC18.3■□□□□ 0.52
CD4P01730 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.3■□□□□ 0.52
CD4P01730 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.3■□□□□ 0.52
CD4P01730 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.3■□□□□ 0.52
CD4P01730 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CD4P01730 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CD4P01730 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CD4P01730 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.3■□□□□ 0.52
CD4P01730 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 DGCR5-201ENST00000399539 862 ntBASIC18.3■□□□□ 0.52
CD4P01730 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CD4P01730 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CD4P01730 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.3■□□□□ 0.52
CD4P01730 MTND6P24-201ENST00000440466 518 ntBASIC18.3■□□□□ 0.52
CD4P01730 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.3■□□□□ 0.52
CD4P01730 ZNF890P-202ENST00000530367 1156 ntBASIC18.3■□□□□ 0.52
CD4P01730 AC124947.2-201ENST00000547118 1133 ntBASIC18.3■□□□□ 0.52
CD4P01730 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.3■□□□□ 0.52
CD4P01730 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.3■□□□□ 0.52
CD4P01730 IGHV3-72-202ENST00000621503 303 ntBASIC18.3■□□□□ 0.52
CD4P01730 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.3■□□□□ 0.52
CD4P01730 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.3■□□□□ 0.52
CD4P01730 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.3■□□□□ 0.52
CD4P01730 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CD4P01730 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD4P01730 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.29■□□□□ 0.52
CD4P01730 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.29■□□□□ 0.52
CD4P01730 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.29■□□□□ 0.52
CD4P01730 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.29■□□□□ 0.52
CD4P01730 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.29■□□□□ 0.52
CD4P01730 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.29■□□□□ 0.52
CD4P01730 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CD4P01730 AC022494.1-201ENST00000466044 728 ntBASIC18.29■□□□□ 0.52
CD4P01730 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CD4P01730 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CD4P01730 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.29■□□□□ 0.52
CD4P01730 HILS1-202ENST00000545329 423 ntBASIC18.29■□□□□ 0.52
CD4P01730 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.29■□□□□ 0.52
CD4P01730 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.29■□□□□ 0.52
CD4P01730 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CD4P01730 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD4P01730 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD4P01730 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.28■□□□□ 0.52
CD4P01730 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms