Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDGFBP01127 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.54■□□□□ 0.24
PDGFBP01127 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PDGFBP01127 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFBP01127 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PDGFBP01127 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFBP01127 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PDGFBP01127 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 AC108860.2-201ENST00000562760 2183 ntBASIC16.53■□□□□ 0.24
PDGFBP01127 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PDGFBP01127 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 IGHJ2P-201ENST00000454480 60 ntBASIC16.53■□□□□ 0.24
PDGFBP01127 RPL13AP20-201ENST00000459725 609 ntBASIC16.53■□□□□ 0.24
PDGFBP01127 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFBP01127 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFBP01127 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PDGFBP01127 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.53■□□□□ 0.24
PDGFBP01127 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFBP01127 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFBP01127 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.53■□□□□ 0.24
PDGFBP01127 MIR6727-201ENST00000620702 65 ntBASIC16.53■□□□□ 0.24
PDGFBP01127 CU634019.7-201ENST00000624153 1185 ntBASIC16.53■□□□□ 0.24
PDGFBP01127 FP236241.2-201ENST00000624906 1185 ntBASIC16.53■□□□□ 0.24
PDGFBP01127 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFBP01127 AC093525.9-201ENST00000624961 1746 ntBASIC16.53■□□□□ 0.24
PDGFBP01127 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PDGFBP01127 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFBP01127 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDGFBP01127 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFBP01127 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFBP01127 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 MIR663B-201ENST00000408361 115 ntBASIC16.52■□□□□ 0.24
PDGFBP01127 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.52■□□□□ 0.24
PDGFBP01127 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PDGFBP01127 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 TIMM17BP1-201ENST00000545713 516 ntBASIC16.52■□□□□ 0.24
PDGFBP01127 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.52■□□□□ 0.24
PDGFBP01127 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PDGFBP01127 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.52■□□□□ 0.24
PDGFBP01127 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.52■□□□□ 0.24
PDGFBP01127 AC061975.2-201ENST00000581722 295 ntBASIC16.52■□□□□ 0.24
PDGFBP01127 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.52■□□□□ 0.24
PDGFBP01127 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.52■□□□□ 0.24
PDGFBP01127 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFBP01127 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFBP01127 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFBP01127 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.52■□□□□ 0.23
PDGFBP01127 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFBP01127 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFBP01127 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFBP01127 KRT8P22-201ENST00000562317 1415 ntBASIC16.52■□□□□ 0.23
PDGFBP01127 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PDGFBP01127 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFBP01127 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms