Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 GGT3P-204ENST00000453783 1664 ntBASIC17.44■□□□□ 0.38
TRUB2O95900 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRUB2O95900 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TRUB2O95900 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 TNRC18P3-201ENST00000441896 2691 ntBASIC17.44■□□□□ 0.38
TRUB2O95900 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.43■□□□□ 0.38
TRUB2O95900 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRUB2O95900 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRUB2O95900 AL031731.1-201ENST00000642131 2094 ntBASIC17.43■□□□□ 0.38
TRUB2O95900 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRUB2O95900 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.43■□□□□ 0.38
TRUB2O95900 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 ME2P1-201ENST00000426028 1970 ntBASIC17.43■□□□□ 0.38
TRUB2O95900 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.43■□□□□ 0.38
TRUB2O95900 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRUB2O95900 DNAJB3-201ENST00000446806 729 ntBASIC17.43■□□□□ 0.38
TRUB2O95900 AC092865.5-201ENST00000545435 363 ntBASIC17.43■□□□□ 0.38
TRUB2O95900 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.43■□□□□ 0.38
TRUB2O95900 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.43■□□□□ 0.38
TRUB2O95900 AL031055.1-201ENST00000606362 631 ntBASIC17.43■□□□□ 0.38
TRUB2O95900 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
TRUB2O95900 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.43■□□□□ 0.38
TRUB2O95900 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRUB2O95900 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.43■□□□□ 0.38
TRUB2O95900 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TRUB2O95900 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRUB2O95900 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.43■□□□□ 0.38
TRUB2O95900 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRUB2O95900 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRUB2O95900 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.43■□□□□ 0.38
TRUB2O95900 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.42■□□□□ 0.38
TRUB2O95900 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRUB2O95900 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.42■□□□□ 0.38
TRUB2O95900 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRUB2O95900 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TRUB2O95900 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.42■□□□□ 0.38
TRUB2O95900 GGT4P-201ENST00000623672 1708 ntBASIC17.42■□□□□ 0.38
TRUB2O95900 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.42■□□□□ 0.38
TRUB2O95900 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.42■□□□□ 0.38
TRUB2O95900 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRUB2O95900 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.42■□□□□ 0.38
TRUB2O95900 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.42■□□□□ 0.38
TRUB2O95900 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.42■□□□□ 0.38
TRUB2O95900 AL009183.1-201ENST00000603760 355 ntBASIC17.42■□□□□ 0.38
TRUB2O95900 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.42■□□□□ 0.38
TRUB2O95900 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.42■□□□□ 0.38
TRUB2O95900 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.42■□□□□ 0.38
TRUB2O95900 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRUB2O95900 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 AC005052.1-201ENST00000625181 2492 ntBASIC17.42■□□□□ 0.38
TRUB2O95900 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.42■□□□□ 0.38
TRUB2O95900 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 AC092364.2-201ENST00000596710 2692 ntBASIC17.42■□□□□ 0.38
TRUB2O95900 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRUB2O95900 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRUB2O95900 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.41■□□□□ 0.38
TRUB2O95900 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TRUB2O95900 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRUB2O95900 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRUB2O95900 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRUB2O95900 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms