Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.01□□□□□ -0.17
SIX6O95475 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.01□□□□□ -0.17
SIX6O95475 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SIX6O95475 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.01□□□□□ -0.17
SIX6O95475 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIX6O95475 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SIX6O95475 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SIX6O95475 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14□□□□□ -0.17
SIX6O95475 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SIX6O95475 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SIX6O95475 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14□□□□□ -0.17
SIX6O95475 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14□□□□□ -0.17
SIX6O95475 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
SIX6O95475 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14□□□□□ -0.17
SIX6O95475 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14□□□□□ -0.17
SIX6O95475 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14□□□□□ -0.17
SIX6O95475 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14□□□□□ -0.17
SIX6O95475 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
SIX6O95475 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SIX6O95475 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14□□□□□ -0.17
SIX6O95475 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14□□□□□ -0.17
SIX6O95475 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14□□□□□ -0.17
SIX6O95475 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SIX6O95475 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14□□□□□ -0.17
SIX6O95475 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SIX6O95475 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 MIR600HG-201ENST00000449175 5984 ntBASIC14□□□□□ -0.17
SIX6O95475 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SIX6O95475 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SIX6O95475 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14□□□□□ -0.17
SIX6O95475 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SIX6O95475 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SIX6O95475 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SIX6O95475 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.99□□□□□ -0.17
SIX6O95475 AC112504.1-201ENST00000623415 1841 ntBASIC13.99□□□□□ -0.17
SIX6O95475 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.99□□□□□ -0.17
SIX6O95475 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 ID1-201ENST00000376105 1233 ntBASIC13.99□□□□□ -0.17
SIX6O95475 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SIX6O95475 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 AC009947.2-201ENST00000444014 672 ntBASIC13.99□□□□□ -0.17
SIX6O95475 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.99□□□□□ -0.17
SIX6O95475 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.99□□□□□ -0.17
SIX6O95475 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.99□□□□□ -0.17
SIX6O95475 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.99□□□□□ -0.17
SIX6O95475 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 AC073648.6-201ENST00000641589 218 ntBASIC13.99□□□□□ -0.17
SIX6O95475 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 AC079781.5-202ENST00000641784 3743 ntBASIC13.99□□□□□ -0.17
SIX6O95475 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SIX6O95475 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SIX6O95475 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.99□□□□□ -0.17
SIX6O95475 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SIX6O95475 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SIX6O95475 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SIX6O95475 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.99□□□□□ -0.17
SIX6O95475 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 CDC14C-201ENST00000428251 1719 ntBASIC13.98□□□□□ -0.17
SIX6O95475 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 AL135999.2-201ENST00000622438 1686 ntBASIC13.98□□□□□ -0.17
SIX6O95475 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms