Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.87■□□□□ 0.45
CSPG5O95196 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.87■□□□□ 0.45
CSPG5O95196 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CSPG5O95196 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.87■□□□□ 0.45
CSPG5O95196 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.87■□□□□ 0.45
CSPG5O95196 AL138828.2-201ENST00000615812 383 ntBASIC17.87■□□□□ 0.45
CSPG5O95196 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.87■□□□□ 0.45
CSPG5O95196 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.87■□□□□ 0.45
CSPG5O95196 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CSPG5O95196 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CSPG5O95196 AC022144.1-201ENST00000602255 1580 ntBASIC17.87■□□□□ 0.45
CSPG5O95196 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSPG5O95196 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.87■□□□□ 0.45
CSPG5O95196 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.86■□□□□ 0.45
CSPG5O95196 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.86■□□□□ 0.45
CSPG5O95196 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CSPG5O95196 COX5BP8-201ENST00000416911 349 ntBASIC17.86■□□□□ 0.45
CSPG5O95196 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.86■□□□□ 0.45
CSPG5O95196 NME2P1-201ENST00000426182 414 ntBASIC17.86■□□□□ 0.45
CSPG5O95196 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.86■□□□□ 0.45
CSPG5O95196 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.86■□□□□ 0.45
CSPG5O95196 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.86■□□□□ 0.45
CSPG5O95196 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.86■□□□□ 0.45
CSPG5O95196 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.86■□□□□ 0.45
CSPG5O95196 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 SPDYE22P-201ENST00000582158 798 ntBASIC17.86■□□□□ 0.45
CSPG5O95196 AC009118.2-201ENST00000613275 655 ntBASIC17.86■□□□□ 0.45
CSPG5O95196 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.86■□□□□ 0.45
CSPG5O95196 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CSPG5O95196 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.86■□□□□ 0.45
CSPG5O95196 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.86■□□□□ 0.45
CSPG5O95196 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CSPG5O95196 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSPG5O95196 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.86■□□□□ 0.45
CSPG5O95196 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CSPG5O95196 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CSPG5O95196 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CSPG5O95196 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.85■□□□□ 0.45
CSPG5O95196 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CSPG5O95196 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.85■□□□□ 0.45
CSPG5O95196 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.85■□□□□ 0.45
CSPG5O95196 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.85■□□□□ 0.45
CSPG5O95196 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.85■□□□□ 0.45
CSPG5O95196 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.85■□□□□ 0.45
CSPG5O95196 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.85■□□□□ 0.45
CSPG5O95196 LINC00896-202ENST00000609602 2128 ntBASIC17.85■□□□□ 0.45
CSPG5O95196 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.85■□□□□ 0.45
CSPG5O95196 AL358472.5-202ENST00000641448 1267 ntBASIC17.85■□□□□ 0.45
CSPG5O95196 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG5O95196 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CSPG5O95196 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG5O95196 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
CSPG5O95196 AC009053.2-201ENST00000563701 2365 ntBASIC17.84■□□□□ 0.45
CSPG5O95196 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CSPG5O95196 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms