Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LDB2O43679 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LDB2O43679 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.64■□□□□ 0.25
LDB2O43679 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LDB2O43679 AL591424.1-201ENST00000442569 1213 ntBASIC16.64■□□□□ 0.25
LDB2O43679 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.64■□□□□ 0.25
LDB2O43679 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
LDB2O43679 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
LDB2O43679 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LDB2O43679 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.64■□□□□ 0.25
LDB2O43679 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.64■□□□□ 0.25
LDB2O43679 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.64■□□□□ 0.25
LDB2O43679 AC021097.1-201ENST00000607902 574 ntBASIC16.64■□□□□ 0.25
LDB2O43679 AC027601.4-201ENST00000611259 610 ntBASIC16.64■□□□□ 0.25
LDB2O43679 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.64■□□□□ 0.25
LDB2O43679 FAM197Y3-203ENST00000618346 717 ntBASIC16.64■□□□□ 0.25
LDB2O43679 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.64■□□□□ 0.25
LDB2O43679 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.64■□□□□ 0.25
LDB2O43679 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LDB2O43679 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.64■□□□□ 0.25
LDB2O43679 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.64■□□□□ 0.25
LDB2O43679 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LDB2O43679 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LDB2O43679 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.63■□□□□ 0.25
LDB2O43679 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 CYP2T1P-202ENST00000641596 2535 ntBASIC16.63■□□□□ 0.25
LDB2O43679 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
LDB2O43679 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LDB2O43679 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LDB2O43679 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 LINC01144-201ENST00000626198 1710 ntBASIC16.63■□□□□ 0.25
LDB2O43679 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.63■□□□□ 0.25
LDB2O43679 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LDB2O43679 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.63■□□□□ 0.25
LDB2O43679 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.63■□□□□ 0.25
LDB2O43679 MIR574-201ENST00000385209 96 ntBASIC16.63■□□□□ 0.25
LDB2O43679 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
LDB2O43679 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.63■□□□□ 0.25
LDB2O43679 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.63■□□□□ 0.25
LDB2O43679 KRT18P3-201ENST00000451602 1288 ntBASIC16.63■□□□□ 0.25
LDB2O43679 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.63■□□□□ 0.25
LDB2O43679 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
LDB2O43679 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
LDB2O43679 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
LDB2O43679 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LDB2O43679 AL009183.1-201ENST00000603760 355 ntBASIC16.63■□□□□ 0.25
LDB2O43679 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.63■□□□□ 0.25
LDB2O43679 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LDB2O43679 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.63■□□□□ 0.25
LDB2O43679 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LDB2O43679 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
LDB2O43679 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LDB2O43679 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.62■□□□□ 0.25
LDB2O43679 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB2O43679 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LDB2O43679 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LDB2O43679 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.62■□□□□ 0.25
LDB2O43679 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.62■□□□□ 0.25
LDB2O43679 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LDB2O43679 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB2O43679 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB2O43679 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LDB2O43679 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB2O43679 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LDB2O43679 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.62■□□□□ 0.25
LDB2O43679 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.62■□□□□ 0.25
LDB2O43679 TNRC18P3-201ENST00000441896 2691 ntBASIC16.62■□□□□ 0.25
LDB2O43679 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.62■□□□□ 0.25
LDB2O43679 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LDB2O43679 MIR940-201ENST00000401276 94 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms