Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 AC005237.2-201ENST00000434368 219 ntBASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA3F8WFD2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 TFAMP1-201ENST00000412727 736 ntBASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 ADH5P3-201ENST00000433842 1137 ntBASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 KRT8P48-201ENST00000515599 1220 ntBASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 AL353732.1-201ENST00000569618 1459 ntBASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA3F8WFD2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 AL592309.1-201ENST00000443127 649 ntBASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms