Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 AL603832.2-201ENST00000566195 2125 ntBASIC16.38■□□□□ 0.21
VGLL3A8MV65 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 AC097376.2-205ENST00000610159 5334 ntBASIC16.38■□□□□ 0.21
VGLL3A8MV65 CES1P1-201ENST00000421606 1704 ntBASIC16.38■□□□□ 0.21
VGLL3A8MV65 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.38■□□□□ 0.21
VGLL3A8MV65 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VGLL3A8MV65 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 AL928921.2-201ENST00000641325 2442 ntBASIC16.37■□□□□ 0.21
VGLL3A8MV65 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 RNA5SP413-201ENST00000516373 109 ntBASIC16.37■□□□□ 0.21
VGLL3A8MV65 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 C2orf69P4-201ENST00000565394 541 ntBASIC16.37■□□□□ 0.21
VGLL3A8MV65 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VGLL3A8MV65 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VGLL3A8MV65 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 AP001972.5-201ENST00000624624 2338 ntBASIC16.36■□□□□ 0.21
VGLL3A8MV65 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 AC060766.5-201ENST00000590539 871 ntBASIC16.36■□□□□ 0.21
VGLL3A8MV65 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms