Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 MIR33B-201ENST00000385104 96 ntBASIC20.64■□□□□ 0.9
RGPD3A6NKT7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 TOMM22P5-201ENST00000416399 439 ntBASIC20.64■□□□□ 0.9
RGPD3A6NKT7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 AKR7A2P1-201ENST00000460134 915 ntBASIC20.64■□□□□ 0.9
RGPD3A6NKT7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 AC091812.3-201ENST00000621362 345 ntBASIC20.64■□□□□ 0.9
RGPD3A6NKT7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 AL607033.1-201ENST00000623900 1599 ntBASIC20.64■□□□□ 0.9
RGPD3A6NKT7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.64■□□□□ 0.9
RGPD3A6NKT7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RGPD3A6NKT7 MIR4321-201ENST00000592276 80 ntBASIC20.64■□□□□ 0.89
RGPD3A6NKT7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 MPRIPP1-201ENST00000452433 1089 ntBASIC20.63■□□□□ 0.89
RGPD3A6NKT7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 AC020914.3-201ENST00000594712 304 ntBASIC20.63■□□□□ 0.89
RGPD3A6NKT7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
RGPD3A6NKT7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 U62317.3-201ENST00000608319 855 ntBASIC20.62■□□□□ 0.89
RGPD3A6NKT7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 BX284668.4-201ENST00000453917 508 ntBASIC20.62■□□□□ 0.89
RGPD3A6NKT7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 AC009486.1-201ENST00000569860 813 ntBASIC20.62■□□□□ 0.89
RGPD3A6NKT7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
RGPD3A6NKT7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 TNXA-203ENST00000507684 2038 ntBASIC20.61■□□□□ 0.89
RGPD3A6NKT7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RGPD3A6NKT7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms