Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 FO538757.1-201ENST00000623083 1397 ntBASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC105233.2-201ENST00000523697 349 ntBASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC069120.2-201ENST00000524091 540 ntBASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AF228730.5-201ENST00000530288 346 ntBASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 LINC00895-201ENST00000629028 1637 ntBASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1G3Q9Y6M4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 TUBB7P-202ENST00000428444 1305 ntBASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 AC190387.1-201ENST00000551683 408 ntBASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 AC073389.1-201ENST00000595595 795 ntBASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSNK1G3Q9Y6M4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms