Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 TERF1P3-201ENST00000505638 1227 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 AC109635.5-201ENST00000533593 962 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 AC087641.1-201ENST00000557561 1021 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 AC140878.1-201ENST00000565277 250 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 AC084121.4-201ENST00000641598 221 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 AF228730.8-201ENST00000642140 221 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 HMGA1P7-201ENST00000406908 502 ntBASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 SPCS2P4-201ENST00000436160 681 ntBASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 RBPMS2P1-201ENST00000437762 623 ntBASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 AC125807.1-201ENST00000483097 614 ntBASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 AL009183.1-201ENST00000603760 355 ntBASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGA9Q9Y5G4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 AC012569.1-201ENST00000591191 1524 ntBASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA9Q9Y5G4 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms