Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AC006538.1-201ENST00000567905 1585 ntBASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AL353732.1-201ENST00000569618 1459 ntBASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AP000344.2-201ENST00000512987 629 ntBASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AC107918.2-201ENST00000530817 355 ntBASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 MIR4492-201ENST00000581627 80 ntBASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AC091812.2-201ENST00000619081 385 ntBASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB1Q9Y5F3 AC131009.4-201ENST00000624048 1740 ntBASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 RHOQP3-201ENST00000437982 621 ntBASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 AC074386.1-202ENST00000463561 864 ntBASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB1Q9Y5F3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHB1Q9Y5F3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms