Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGC3Q9UN70 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 MTHFR-217ENST00000641820 1569 ntBASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 PGAM5P1-201ENST00000518923 814 ntBASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 AL671883.3-201ENST00000603274 991 ntBASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC3Q9UN70 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 AC040169.1-201ENST00000565382 521 ntBASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC3Q9UN70 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGC3Q9UN70 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms