Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 AC013467.2-201ENST00000605472 835 ntBASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 AL158211.3-201ENST00000607385 239 ntBASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 AL390754.1-201ENST00000619088 582 ntBASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 AL671710.1-201ENST00000610245 2349 ntBASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT1Q9P2V4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT1Q9P2V4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.08■□□□□ 0.17
LRIT1Q9P2V4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.08■□□□□ 0.17
LRIT1Q9P2V4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRIT1Q9P2V4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
LRIT1Q9P2V4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 AC142381.1-201ENST00000426099 345 ntBASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 AL512638.1-201ENST00000457493 794 ntBASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 AC097493.3-201ENST00000509725 367 ntBASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 RARRES2P9-201ENST00000565168 469 ntBASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 AC073389.1-201ENST00000595595 795 ntBASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRIT1Q9P2V4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 PRYP6-201ENST00000514804 343 ntBASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 AC018529.1-201ENST00000613063 361 ntBASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 AP3S2-216ENST00000617003 1561 ntBASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRIT1Q9P2V4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms