Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TLR9Q9NR96 AC098859.1-201ENST00000502915 1238 ntBASIC17.59■□□□□ 0.41
TLR9Q9NR96 RNA5SP410-201ENST00000516285 106 ntBASIC17.59■□□□□ 0.41
TLR9Q9NR96 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.59■□□□□ 0.41
TLR9Q9NR96 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.59■□□□□ 0.41
TLR9Q9NR96 AC105021.1-202ENST00000570572 669 ntBASIC17.59■□□□□ 0.41
TLR9Q9NR96 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.59■□□□□ 0.41
TLR9Q9NR96 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.59■□□□□ 0.41
TLR9Q9NR96 AC084346.2-201ENST00000607097 949 ntBASIC17.59■□□□□ 0.41
TLR9Q9NR96 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.59■□□□□ 0.41
TLR9Q9NR96 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR9Q9NR96 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR9Q9NR96 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR9Q9NR96 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR9Q9NR96 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TLR9Q9NR96 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TLR9Q9NR96 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TLR9Q9NR96 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TLR9Q9NR96 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.58■□□□□ 0.41
TLR9Q9NR96 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TLR9Q9NR96 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.58■□□□□ 0.41
TLR9Q9NR96 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.58■□□□□ 0.41
TLR9Q9NR96 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TLR9Q9NR96 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.58■□□□□ 0.41
TLR9Q9NR96 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TLR9Q9NR96 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TLR9Q9NR96 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.58■□□□□ 0.41
TLR9Q9NR96 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR9Q9NR96 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR9Q9NR96 AC012313.1-201ENST00000593393 3059 ntBASIC17.58■□□□□ 0.4
TLR9Q9NR96 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR9Q9NR96 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR9Q9NR96 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 AC135586.1-201ENST00000539323 574 ntBASIC17.58■□□□□ 0.4
TLR9Q9NR96 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR9Q9NR96 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR9Q9NR96 AC099398.1-201ENST00000567919 2776 ntBASIC17.58■□□□□ 0.4
TLR9Q9NR96 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR9Q9NR96 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.58■□□□□ 0.4
TLR9Q9NR96 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 IGHV3-71-201ENST00000523324 359 ntBASIC17.57■□□□□ 0.4
TLR9Q9NR96 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 BANF1P1-201ENST00000553684 263 ntBASIC17.57■□□□□ 0.4
TLR9Q9NR96 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR9Q9NR96 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TLR9Q9NR96 BTBD7P1-201ENST00000447253 1453 ntBASIC17.56■□□□□ 0.4
TLR9Q9NR96 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
TLR9Q9NR96 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TLR9Q9NR96 AL080243.2-201ENST00000418783 582 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms