Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 SPDYE15P-201ENST00000424157 909 ntBASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 TUBB8P12-201ENST00000308911 1335 ntBASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 TUBB7P-202ENST00000428444 1305 ntBASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 TUBB8P7-204ENST00000567960 1332 ntBASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SND1-IT1Q9HBX3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 STARP1-201ENST00000397973 869 ntBASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 AC007967.3-201ENST00000434308 558 ntBASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 MIR4497-201ENST00000583208 89 ntBASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 ME2P1-201ENST00000426028 1970 ntBASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SND1-IT1Q9HBX3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms