Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 OR7E14P-202ENST00000530490 1290 ntBASIC15.39■□□□□ 0.05
TRIM2Q9C040 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 REXO1L3P-201ENST00000622202 1288 ntBASIC15.39■□□□□ 0.05
TRIM2Q9C040 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM2Q9C040 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM2Q9C040 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 AL031284.1-201ENST00000419297 478 ntBASIC15.38■□□□□ 0.05
TRIM2Q9C040 AL590627.1-203ENST00000421194 1026 ntBASIC15.38■□□□□ 0.05
TRIM2Q9C040 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 MIR4492-201ENST00000581627 80 ntBASIC15.38■□□□□ 0.05
TRIM2Q9C040 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 AC120114.3-201ENST00000611923 658 ntBASIC15.38■□□□□ 0.05
TRIM2Q9C040 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 AC148477.8-201ENST00000624298 468 ntBASIC15.38■□□□□ 0.05
TRIM2Q9C040 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM2Q9C040 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM2Q9C040 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 AC006449.5-201ENST00000610658 2098 ntBASIC15.37■□□□□ 0.05
TRIM2Q9C040 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 AC018712.1-201ENST00000455767 687 ntBASIC15.37■□□□□ 0.05
TRIM2Q9C040 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms