Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AC092053.1-201ENST00000605787 1936 ntBASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AC092183.1-201ENST00000469884 875 ntBASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 AL161645.1-201ENST00000622716 1255 ntBASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 SLC22A20-204ENST00000530038 1673 ntBASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP3Q9BWW4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 CNN2P11-201ENST00000429351 262 ntBASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 AP000344.2-201ENST00000512987 629 ntBASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 FAM86C2P-203ENST00000528684 1004 ntBASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 AL121761.2-201ENST00000598007 1648 ntBASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP3Q9BWW4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSBP3Q9BWW4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms