Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 MIR346-201ENST00000362234 95 ntBASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 PRYP6-201ENST00000514804 343 ntBASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AC093520.2-201ENST00000561830 333 ntBASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AC004449.1-201ENST00000564240 433 ntBASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AP000842.3-202ENST00000569238 1080 ntBASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AC073389.1-201ENST00000595595 795 ntBASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC00628-201ENST00000628516 1289 ntBASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CDK5RAP1Q96SZ6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDK5RAP1Q96SZ6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.27■□□□□ 0.35
CDK5RAP1Q96SZ6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
CDK5RAP1Q96SZ6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CDK5RAP1Q96SZ6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDK5RAP1Q96SZ6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.27■□□□□ 0.35
CDK5RAP1Q96SZ6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDK5RAP1Q96SZ6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK5RAP1Q96SZ6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AL512652.2-201ENST00000625156 1716 ntBASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AL645939.2-201ENST00000427340 991 ntBASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AL512356.2-201ENST00000546955 174 ntBASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 AC005915.1-201ENST00000624912 2018 ntBASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CDK5RAP1Q96SZ6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms