Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 MSTO2P-201ENST00000314835 1709 ntBASIC27.05■■□□□ 1.92
IFT140Q96RY7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
IFT140Q96RY7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
IFT140Q96RY7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
IFT140Q96RY7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
IFT140Q96RY7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
IFT140Q96RY7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 AC005695.3-201ENST00000614522 232 ntBASIC27.05■■□□□ 1.92
IFT140Q96RY7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 HADH-212ENST00000638621 741 ntTSL 5 BASIC27.05■■□□□ 1.92
IFT140Q96RY7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
IFT140Q96RY7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
IFT140Q96RY7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC27.04■■□□□ 1.92
IFT140Q96RY7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 AC120045.2-201ENST00000567334 178 ntBASIC27.04■■□□□ 1.92
IFT140Q96RY7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC27.04■■□□□ 1.92
IFT140Q96RY7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
IFT140Q96RY7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC27.04■■□□□ 1.92
IFT140Q96RY7 AL139011.1-202ENST00000642063 584 ntBASIC27.04■■□□□ 1.92
IFT140Q96RY7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
IFT140Q96RY7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
IFT140Q96RY7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
IFT140Q96RY7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
IFT140Q96RY7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
IFT140Q96RY7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
IFT140Q96RY7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 AC007969.1-201ENST00000433675 447 ntBASIC27.03■■□□□ 1.92
IFT140Q96RY7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
IFT140Q96RY7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
IFT140Q96RY7 AL607033.1-201ENST00000623900 1599 ntBASIC27.02■■□□□ 1.92
IFT140Q96RY7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
IFT140Q96RY7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC27.02■■□□□ 1.92
IFT140Q96RY7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
IFT140Q96RY7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
IFT140Q96RY7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
IFT140Q96RY7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
IFT140Q96RY7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC27.02■■□□□ 1.92
IFT140Q96RY7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC27.02■■□□□ 1.92
IFT140Q96RY7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC27.02■■□□□ 1.92
IFT140Q96RY7 SCARNA20.5-201ENST00000516991 142 ntBASIC27.02■■□□□ 1.92
IFT140Q96RY7 AC009486.1-201ENST00000569860 813 ntBASIC27.02■■□□□ 1.92
IFT140Q96RY7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC27.02■■□□□ 1.92
IFT140Q96RY7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
IFT140Q96RY7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC27.02■■□□□ 1.92
IFT140Q96RY7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC27.02■■□□□ 1.92
IFT140Q96RY7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC27.02■■□□□ 1.92
IFT140Q96RY7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
IFT140Q96RY7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC27.01■■□□□ 1.92
IFT140Q96RY7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
IFT140Q96RY7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
IFT140Q96RY7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC27.01■■□□□ 1.92
IFT140Q96RY7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC27.01■■□□□ 1.92
IFT140Q96RY7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC27.01■■□□□ 1.91
IFT140Q96RY7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
IFT140Q96RY7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
IFT140Q96RY7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
IFT140Q96RY7 MIR4722-201ENST00000578292 60 ntBASIC27.01■■□□□ 1.91
IFT140Q96RY7 AC005252.2-201ENST00000624630 1141 ntBASIC27.01■■□□□ 1.91
IFT140Q96RY7 AC093503.3-201ENST00000624917 2352 ntBASIC27.01■■□□□ 1.91
IFT140Q96RY7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
IFT140Q96RY7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
IFT140Q96RY7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
IFT140Q96RY7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC27.01■■□□□ 1.91
IFT140Q96RY7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC27.01■■□□□ 1.91
IFT140Q96RY7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC27.01■■□□□ 1.91
IFT140Q96RY7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
IFT140Q96RY7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC27.01■■□□□ 1.91
IFT140Q96RY7 ABALON-201ENST00000629058 1903 ntBASIC27.01■■□□□ 1.91
IFT140Q96RY7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC27.01■■□□□ 1.91
IFT140Q96RY7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
IFT140Q96RY7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC27■■□□□ 1.91
IFT140Q96RY7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms