Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 RARRES2P8-201ENST00000566335 367 ntBASIC17.18■□□□□ 0.34
RPRD1AQ96P16 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPRD1AQ96P16 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 FAM86C2P-203ENST00000528684 1004 ntBASIC17.17■□□□□ 0.34
RPRD1AQ96P16 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 AC079781.4-201ENST00000641908 219 ntBASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPRD1AQ96P16 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 WASH6P-202ENST00000359512 1437 ntBASIC17.16■□□□□ 0.34
RPRD1AQ96P16 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 ADH5P3-201ENST00000433842 1137 ntBASIC17.16■□□□□ 0.34
RPRD1AQ96P16 AP006288.1-201ENST00000446065 395 ntBASIC17.16■□□□□ 0.34
RPRD1AQ96P16 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 TIMM8BP1-201ENST00000452384 211 ntBASIC17.16■□□□□ 0.34
RPRD1AQ96P16 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RPRD1AQ96P16 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms