Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 AL513480.1-201ENST00000451731 511 ntBASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 AC145285.3-201ENST00000564603 959 ntBASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 PKD1P1-201ENST00000458669 6805 ntBASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 Z83851.2-201ENST00000609564 659 ntBASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PDLIM5Q96HC4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 AL031055.1-201ENST00000606362 631 ntBASIC16.27■□□□□ 0.2
PDLIM5Q96HC4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM5Q96HC4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms