Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 AC092933.1-201ENST00000393644 945 ntBASIC19.27■□□□□ 0.68
CDCA5Q96FF9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 CTBP2P5-201ENST00000454986 1264 ntBASIC19.27■□□□□ 0.68
CDCA5Q96FF9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 AC074044.1-201ENST00000609673 707 ntBASIC19.27■□□□□ 0.68
CDCA5Q96FF9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCA5Q96FF9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCA5Q96FF9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCA5Q96FF9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDCA5Q96FF9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 PDIA3P1-201ENST00000471856 1510 ntBASIC19.26■□□□□ 0.67
CDCA5Q96FF9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 HAUS4P1-201ENST00000406739 1145 ntBASIC19.26■□□□□ 0.67
CDCA5Q96FF9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 AC104596.2-201ENST00000512793 793 ntBASIC19.26■□□□□ 0.67
CDCA5Q96FF9 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 RARRES2P5-201ENST00000564013 466 ntBASIC19.26■□□□□ 0.67
CDCA5Q96FF9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 AC233724.13-201ENST00000598383 410 ntBASIC19.26■□□□□ 0.67
CDCA5Q96FF9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA5Q96FF9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 TIMM17BP1-201ENST00000545713 516 ntBASIC19.25■□□□□ 0.67
CDCA5Q96FF9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDCA5Q96FF9 AC020763.4-201ENST00000623414 4170 ntBASIC19.25■□□□□ 0.67
CDCA5Q96FF9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 AC124947.2-201ENST00000547118 1133 ntBASIC19.24■□□□□ 0.67
CDCA5Q96FF9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 AC025048.3-201ENST00000590609 569 ntBASIC19.24■□□□□ 0.67
CDCA5Q96FF9 AC005702.4-201ENST00000618393 416 ntBASIC19.24■□□□□ 0.67
CDCA5Q96FF9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.24■□□□□ 0.67
CDCA5Q96FF9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDCA5Q96FF9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms