Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 UPF3AP3-201ENST00000420996 769 ntBASIC15□□□□□ -0.01
CPNE4Q96A23 GPX1P2-201ENST00000429271 606 ntBASIC15□□□□□ -0.01
CPNE4Q96A23 ACTG1P14-201ENST00000446382 1122 ntBASIC15□□□□□ -0.01
CPNE4Q96A23 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CPNE4Q96A23 AC109635.5-201ENST00000533593 962 ntBASIC15□□□□□ -0.01
CPNE4Q96A23 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15□□□□□ -0.01
CPNE4Q96A23 U1.21-201ENST00000580816 167 ntBASIC15□□□□□ -0.01
CPNE4Q96A23 AL031055.1-201ENST00000606362 631 ntBASIC15□□□□□ -0.01
CPNE4Q96A23 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15□□□□□ -0.01
CPNE4Q96A23 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15□□□□□ -0.01
CPNE4Q96A23 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CPNE4Q96A23 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15□□□□□ -0.01
CPNE4Q96A23 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15□□□□□ -0.01
CPNE4Q96A23 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE4Q96A23 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.99□□□□□ -0.01
CPNE4Q96A23 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 AC105020.1-201ENST00000435356 2205 ntBASIC14.99□□□□□ -0.01
CPNE4Q96A23 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 FAM58CP-201ENST00000435741 640 ntBASIC14.99□□□□□ -0.01
CPNE4Q96A23 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 AC005829.1-201ENST00000570002 483 ntBASIC14.99□□□□□ -0.01
CPNE4Q96A23 AP002472.1-201ENST00000577490 586 ntBASIC14.99□□□□□ -0.01
CPNE4Q96A23 AC010327.4-202ENST00000591484 748 ntBASIC14.99□□□□□ -0.01
CPNE4Q96A23 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 AL009183.1-201ENST00000603760 355 ntBASIC14.99□□□□□ -0.01
CPNE4Q96A23 AC091812.2-201ENST00000619081 385 ntBASIC14.99□□□□□ -0.01
CPNE4Q96A23 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CPNE4Q96A23 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CPNE4Q96A23 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 RPSAP43-201ENST00000402237 625 ntBASIC14.98□□□□□ -0.01
CPNE4Q96A23 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CPNE4Q96A23 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
CPNE4Q96A23 AC021097.1-201ENST00000607902 574 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms